rna seq databases Search Results


arabidopsis rna-seq database  (SusTech GmbH)
90
SusTech GmbH arabidopsis rna-seq database
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Arabidopsis Rna Seq Database, supplied by SusTech GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pmc09342984-144-3-7?v=SusTech+GmbH
Average 90 stars, based on 1 article reviews
arabidopsis rna-seq database - by Bioz Stars, 2026-08
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mining of publicly available rna-seq databases  (Genomatix gmbh)
90
Genomatix gmbh mining of publicly available rna-seq databases
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Mining Of Publicly Available Rna Seq Databases, supplied by Genomatix gmbh, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pm35294884-331-5-7?v=Genomatix+gmbh
Average 90 stars, based on 1 article reviews
mining of publicly available rna-seq databases - by Bioz Stars, 2026-08
90/100 stars
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plant public rna-seq database  (SusTech GmbH)
90
SusTech GmbH plant public rna-seq database
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Plant Public Rna Seq Database, supplied by SusTech GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pmc11707655-174-17-23?v=SusTech+GmbH
Average 90 stars, based on 1 article reviews
plant public rna-seq database - by Bioz Stars, 2026-08
90/100 stars
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python-based suite to process raw rna-seq or exome-seq data for customized database construction  (SourceForge net)
90
SourceForge net python-based suite to process raw rna-seq or exome-seq data for customized database construction
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Python Based Suite To Process Raw Rna Seq Or Exome Seq Data For Customized Database Construction, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pmc05461547-9-19-2?v=SourceForge+net
Average 90 stars, based on 1 article reviews
python-based suite to process raw rna-seq or exome-seq data for customized database construction - by Bioz Stars, 2026-08
90/100 stars
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maize rna-seq database  (SusTech GmbH)
90
SusTech GmbH maize rna-seq database
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Maize Rna Seq Database, supplied by SusTech GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pmc10814199-59-16-20?v=SusTech+GmbH
Average 90 stars, based on 1 article reviews
maize rna-seq database - by Bioz Stars, 2026-08
90/100 stars
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gbm single cell rna-seq (scrna-seq) database  (Broad Institute Inc)
90
Broad Institute Inc gbm single cell rna-seq (scrna-seq) database
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Gbm Single Cell Rna Seq (Scrna Seq) Database, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pmc11209873__NIHMS2000496___supplement___1-79-14-26?v=Broad+Institute+Inc
Average 90 stars, based on 1 article reviews
gbm single cell rna-seq (scrna-seq) database - by Bioz Stars, 2026-08
90/100 stars
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rice rna-seq database  (SusTech GmbH)
90
SusTech GmbH rice rna-seq database
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Rice Rna Seq Database, supplied by SusTech GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pmc11022797-73-11-14?v=SusTech+GmbH
Average 90 stars, based on 1 article reviews
rice rna-seq database - by Bioz Stars, 2026-08
90/100 stars
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combined red blood cell, gill and intestine rna seq database  (LC Sciences)
90
LC Sciences combined red blood cell, gill and intestine rna seq database
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Combined Red Blood Cell, Gill And Intestine Rna Seq Database, supplied by LC Sciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pm26487347-74-10-19?v=LC+Sciences
Average 90 stars, based on 1 article reviews
combined red blood cell, gill and intestine rna seq database - by Bioz Stars, 2026-08
90/100 stars
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singlecell rna seq database  (Muris Inc)
86
Muris Inc singlecell rna seq database
Detection of the CLE2 peptide from <t>Arabidopsis</t> xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.
Singlecell Rna Seq Database, supplied by Muris Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna+seq+databases/pm40702549-81-22-25?v=Muris+Inc
Average 86 stars, based on 1 article reviews
singlecell rna seq database - by Bioz Stars, 2026-08
86/100 stars
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Image Search Results


Detection of the CLE2 peptide from Arabidopsis xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.

Journal: Plant Physiology

Article Title: Long-distance translocation of CLAVATA3/ESR-related 2 peptide and its positive effect on roots sucrose status

doi: 10.1093/plphys/kiac227

Figure Lengend Snippet: Detection of the CLE2 peptide from Arabidopsis xylem exudate. A, Arabidopsis xylem exudate was collected from cut surfaces of hypocotyls. B, Base peak chromatogram of purified Arabidopsis xylem exudate. C, The MS/MS spectrum of m/z 863.4 eluted at 9.0 min in (B) showed a fragmentation pattern identical to that of arabinosylated CLE2 peptides. B and C, One typical experiment of two replicates is shown. D, Relative mRNA level of the CLE2 gene. Plants grown on sucrose-free or 1% sucrose-containing media were treated with 50-µM DCMU or incubated in darkness for 24 h. The expression levels of each CLE2 gene in the treated samples were normalized to control roots. The dots represent individual measurements. Each result is the mean ± standard error of the mean ( sem ) of measurements obtained from three independent experiments.

Article Snippet: Based on the Arabidopsis RNA-seq database ( http://ipf.sustech.edu.cn/pub/athrna/ ), the fragments per kilobase of transcript per million mapped reads values of the CLE1 and CLE4 – 7 genes appear to be comparable to those of the CLE2 and CLE3 genes .

Techniques: Purification, Tandem Mass Spectroscopy, Incubation, Expressing, Control